Organoids Pamphlet

 The Building Blocks for Organoid Research


Organoid models include three-dimensional (3D) cell culture systems that closely resemble in vivo organ or tissue. These 3D systems reproduce the complex spatial morphology of a differentiated tissue to allow biologically relevant cell-cell and cell-matrix interactions, ideally, sharing similar physiological responses with in vivo differentiated tissues. The major focus of future organoid studies, beside the study of developmental processes, will most likely be in drug testing and disease modeling, such as developmental disorders, genetic conditions, cancer and degenerative disorders. The hope is that organoids are another step in the long way towards in vitro construction of tissues and organs for transplantation in patients.

Organoids Proteins & Growth Factors References
Stomach Organoids

EGF

FGF-10

Noggin

R-Spondin-1

Wnt-3a

Mahe M. et al. (2013) Curr. Protoc. Mouse Biol. 3:217

Sato T. and H. Clevers (2015) Cell. 161:1700

Bartfeld S. et al. (2015) Gastroenterology. 148:126

Small Intestinal and Colonic Organoids

EGF

Noggin

R-Spondin-1

Wnt-3a

Mahe M. et al. (2013) Curr. Protoc. Mouse Biol. 3:217

Sato T. et al. (2011) Gastroenterology. 141:1762

Sato T. and H. Clevers (2015) Cell. 161:1700

Sato T. and H. Clevers (2009) Nature. 459:262

Jung P. et al. (2011) Nature Medicine. 17:1225

Liver Organoids

BMP-4

EGF

FGF-basic

FGF-10

HGF

Noggin

R-Spondin-1

Wnt-3a 

Sato T. and H. Clevers (2015) Cell. 161:1700

Takebe T. et al. (2013) Nature 499:481

Broutier L. et al. (2016) Nat. Protocols. 11: 1724 

Pancreatic Organoids

EGF

FGF-10

Noggin

R-Spondin-1

Wnt-3a

Sato T. and H. Clevers (2015) Cell. 161:1700


Boj S.F. et al. (2015) Cell. 160:324.

Broutier L. et al. (2016) Nature Protocols. 11:1724

Prostate Organoids

Activin A

EGF

FGF-basic

FGF-10

Noggin

R-Spondin-1 

Karthaus W.R. et al. (2014) Cell. 159:163.

Drost J. et al (2016) Nat. Protocols. 11:347

 Lung

Activin A

FGF-basic

FGF-4

Noggin

Dye B.R. et al. (2015) eLIFE. 4:e05098
Kidney Organoids

Activin A

BMP-2

BMP-4

BMP-7

FGF-basic

FGF-9

Xia Y. et al. (2014) Nature Protocols. 9:2693.

Xia Y. et al. (2013) Nature Cell Biology. 15:1507.

Takasato M. et al. (2014) Nat. Cell Biol. 16:118 

Brain Organoids

FGF-basic

Noggin

DKK-1

EGF

BDNF

GDNF

Lancaster M.A. and J. A. Knoblich (2014) Nat. Protocols. 9:2329

Mariani J. et al. (2015) Cell. 162:375 Li Y. et al. (2017) Cell Stem Cell 20:1 

Inner Ear Organoids

BMP-4

FGF-basic 

Koehler K.R. and E. Hashino (2014) Nat. Protocols. 9:1229.
Immuno Germinal Center - Like Organoids IL-4 Purwada A. and Singh A. (2017) Nat. Protocols. 12:168 
Retina Organoids

Sonic Hedgehog (Shh)

Wnt-3a 

Nakano T. et al. (2012) Cell stem cell. 10: 771 
Mammary Organoids

Heregulinβ-1 

R-spondin-1

R-spondin-2

Noggin

EGF

FGF-basic

FGF-10

Wnt-3a

Prolactin

Jardé T.et al. (2016)  Nat. Commun. 7: 13207

Jamieson PR. et al. (2016) Develompent. :dev-145045